Welcome to molyso’s documentation!

See molyso Readme for information.

Indices and tables

• Index
• Module Index
• Search Page

Contents:

• molyso Readme
  • Publication
  • Example Datasets
  • Documentation
  • License
  • Prerequisites
  • Ways to install molyso
    • With Anaconda
    • Alternatively, manually from github
  • First Steps
  • Docker
  • Third Party Licenses
• License
  • The 2-clause BSD License
• Tunables
  • Introduction
  • Table of Tunables
• molyso2vizardous
• Example Jupyter Notebooks
  • Example Analysis
  • Example molyso Embedding
• molyso Developer Documentation
  • Submodules
    • molyso.debugging package
      • molyso.debugging.debugplot module
    • molyso.generic package
      • molyso.generic.etc module
      • molyso.generic.fft module
      • molyso.generic.otsu module
      • molyso.generic.registration module
      • molyso.generic.rotation module
      • molyso.generic.signal module
      • molyso.generic.smoothing module
      • molyso.generic.tunable module
    • molyso.imageio package
      • molyso.imageio.imagestack module
      • molyso.imageio.imagestack_ometiff module
    • molyso.mm package
      • molyso.mm.cell_detection module
      • molyso.mm.channel_detection module
      • molyso.mm.fluorescence module
      • molyso.mm.highlevel module
      • molyso.mm.highlevel_interactive_ground_truth module
      • molyso.mm.highlevel_interactive_viewer module
      • molyso.mm.image module
      • molyso.mm.tracking module
      • molyso.mm.tracking_infrastructure module
      • molyso.mm.tracking_output module
    • molyso.test package
      • Module contents