molyso.debugging package

Debugging Module. Currently only contains DebugPlot, which is imported here for ease of use.

molyso.debugging.debugplot module

documentation

class molyso.debugging.debugplot.DebugPlot(*args, **kwargs)

Bases: object

The DebugPlot class serves as an switchable abstraction layer to add plotting debug output facilities.

active = True

context = ''

default_config = {'figure.dpi': 150, 'figure.figsize': (12, 8), 'image.cmap': 'gray'}

diverted_outputs = {}

exit_handler_registered = False

exit_handlers = []

exp_plot_debugging = False

file_prefix = 'debug'

file_suffix = '.pdf'

files_to_merge = []

force_active = False

classmethod get_context()

Returns:

classmethod get_file_for_merge()

Returns:

individual_and_merge = False

individual_file_prefix = 'debug'

individual_files = False

classmethod new_pdf_output(filename, collected)

Parameters:

• filename –
• collected –

classmethod pdfopener(filename)

Opens a new PdfPages output, ensuring it will be closed at exit.

Parameters:filename – filename Returns:

post_figure = 'close'

pp = None

classmethod set_context(**kwargs)

Parameters:kwargs –

throw_on_anything = True

exception molyso.debugging.debugplot.DebugPlotInterruptException

Bases: Exception

Only for internal usage. Used to interrupt plot drawing early if it is disabled.

class molyso.debugging.debugplot.DebugPlotInterruptThrower

Bases: object

Dummy object which raises an exception on every call. To be used when debug mode is deactivated.

molyso.debugging.debugplot.inject_poly_drawing_helper(p)

Parameters:p –

molyso.debugging.debugplot.next_free_filename(prefix, suffix)

Parameters:

• prefix –
• suffix –

Returns:

raise IOError:

molyso.debugging.debugplot.poly_drawing_helper(p, coordinates, **kwargs)

Parameters:

• p –
• coordinates –
• kwargs –